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1

The landscape of genomic alterations across childhood cancers

Gröbner, Susanne N., Worst, Barbara C., Weischenfeldt, Joachim, Buchhalter, Ivo, Kleinheinz, Kortine, Rudneva, Vasilisa A., Johann, Pascal D., Balasubramanian, Gnana Prakash, Segura-Wang, Maia, Brabet

Journal:

Year:

2018

Language:

english

File:

PDF, 7.71 MB

english, 2018

2

A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy

Shi,, Bao,, Weischenfeldt,, Schaefer,, Rogowski,, Schmidt-Hegemann,, Unger,, Lauber,, Wang,, Buchner,, Stief,, Schlomm,, Belka,, Li,

Journal:

Year:

2019

Language:

english

File:

PDF, 1.99 MB

english, 2019

3

A cell-based model system links chromothripsis with hyperploidy

Mardin, B. R., Drainas, A. P., Waszak, S. M., Weischenfeldt, J., Isokane, M., Stutz, A. M., Raeder, B., Efthymiopoulos, T., Buccitelli, C., Segura-Wang, M., Northcott, P., Pfister, S. M., Lichter, P.,

Journal:

Molecular Systems Biology

Year:

2015

Language:

english

File:

PDF, 8.32 MB

english, 2015

4

A high level of estrogen-stimulated proteins selects breast cancer patients treated with adjuvant endocrine therapy with good prognosis

L. H. Weischenfeldt, Katrine, Kirkegaard, Tove, Rasmussen, Birgitte B., Giobbie-Hurder, Anita, Jensen, Maj-Britt, Ejlertsen, Bent, Lykkesfeldt, Anne E.

Journal:

Acta Oncologica

Year:

2017

Language:

english

File:

PDF, 1022 KB

english, 2017

5

Genomes of early onset prostate cancer

Weischenfeldt, Joachim, Korbel, Jan O.

Journal:

Current Opinion in Urology

Year:

2017

Language:

english

File:

PDF, 420 KB

english, 2017

6

The whole-genome landscape of medulloblastoma subtypes

Northcott, Paul A., Buchhalter, Ivo, Morrissy, A. Sorana, Hovestadt, Volker, Weischenfeldt, Joachim, Ehrenberger, Tobias, Gröbner, Susanne, Segura-Wang, Maia, Zichner, Thomas, Rudneva, Vasilisa A., Wa

Journal:

Year:

2017

Language:

english

File:

PDF, 9.48 MB

english, 2017

7

Exome sequencing of osteosarcoma reveals mutation signatures reminiscent of BRCA deficiency

Kovac, Michal, Blattmann, Claudia, Ribi, Sebastian, Smida, Jan, Mueller, Nikola S., Engert, Florian, Castro-Giner, Francesc, Weischenfeldt, Joachim, Kovacova, Monika, Krieg, Andreas, Andreou, Dimosthe

Journal:

Nature Communications

Year:

2015

Language:

english

File:

PDF, 1.14 MB

english, 2015

8

Integrative Genomic Analyses Reveal an Androgen-Driven Somatic Alteration Landscape in Early-Onset Prostate Cancer

Weischenfeldt, Joachim, Simon, Ronald, Feuerbach, Lars, Schlangen, Karin, Weichenhan, Dieter, Minner, Sarah, Wuttig, Daniela, Warnatz, Hans-Jörg, Stehr, Henning, Rausch, Tobias, Jäger, Natalie, Gu, Le

Journal:

Year:

2013

Language:

english

File:

PDF, 1.20 MB

english, 2013

9

Clonal hematopoiesis in elderly twins: concordance, discordance, and mortality

Hansen, Jakob Werner, Pedersen, Dorthe Almind, Larsen, Lisbeth Aagaard, Husby, Simon, Clemmensen, Signe Bedsted, Hjelmborg, Jacob, Favero, Francesco, Weischenfeldt, Joachim, Christensen, Kaare, GrÃ¸nb

Journal:

Year:

2020

File:

PDF, 888 KB

2020

10

Genome Sequencing of Pediatric Medulloblastoma Links Catastrophic DNA Rearrangements with TP53 Mutations

Tobias Rausch, David T.W. Jones, Marc Zapatka, Adrian M. Stütz, Thomas Zichner, Joachim Weischenfeldt, Natalie Jäger, Marc Remke, David Shih, Paul A. Northcott, Elke Pfaff, Jelena Tica, Qi Wang, Luca

Journal:

Year:

2012

Language:

english

File:

PDF, 1.72 MB

english, 2012

11

Prevalence of chromosomal rearrangements involving non-ETS genes in prostate cancer

Kluth, Martina, Galal, Rami, Krohn, Antje, Weischenfeldt, Joachim, Tsourlakis, Christina, Paustian, Lisa, Ahrary, Ramin, Ahmed, Malik, Scherzai, Sekander, Meyer, Anne, Sirma, Hï¿½seyin, Korbel, Jan, S

Journal:

International Journal of Oncology

Year:

2015

Language:

english

File:

PDF, 286 KB

english, 2015

12

UPF2 Is a Critical Regulator of Liver Development, Function and Regeneration

Thoren, Lina A., Nørgaard, Gitte A., Weischenfeldt, Joachim, Waage, Johannes, Jakobsen, Janus S., Damgaard, Inge, Bergström, Frida C., Blom, Anna M., Borup, Rehannah, Bisgaard, Hanne Cathrine, Porse,

Journal:

Year:

2010

Language:

english

File:

PDF, 10.35 MB

english, 2010

13

Messenger RNA Surveillance: Neutralizing Natural Nonsense

Joachim Weischenfeldt, Jens Lykke-Andersen, Bo Porse

Journal:

Current Biology

Year:

2005

Language:

english

File:

PDF, 132 KB

english, 2005

14

Phenotypic impact of genomic structural variation: insights from and for human disease

Weischenfeldt, Joachim, Symmons, Orsolya, Spitz, François, Korbel, Jan O.

Journal:

Nature Reviews Genetics

Year:

2013

Language:

english

File:

PDF, 907 KB

english, 2013

15

Pan-cancer analysis of somatic copy-number alterations implicates IRS4 and IGF2 in enhancer hijacking

Weischenfeldt, Joachim, Dubash, Taronish, Drainas, Alexandros P, Mardin, Balca R, Chen, Yuanyuan, Stütz, Adrian M, Waszak, Sebastian M, Bosco, Graziella, Halvorsen, Ann Rita, Raeder, Benjamin, Efthymi

Journal:

Nature Genetics

Year:

2016

Language:

english

File:

PDF, 1.12 MB

english, 2016

16

CLONAL HEMATOPOIESIS IN ELDERLY TWINS: CONCORDANCE, DISCORDANCE AND SURVIVAL

Hansen, J. W., Pedersen, D. A., Larsen, L. A., Husby, S., Favero, F., Weischenfeldt, J., Christensen, K., GrÃ¸nbÃ¦k, K.

Journal:

Year:

2019

File:

PDF, 167 KB

2019

17

Mammalian tissues defective in nonsense-mediated mRNA decay display highly aberrant splicing patterns

Joachim Weischenfeldt, Johannes Waage, Geng Tian, Jing Zhao, Inge Damgaard, Janus Schou Jakobsen, Karsten Kristiansen, Anders Krogh, Jun Wang, Bo T Porse

Journal:

Year:

2012

Language:

english

File:

PDF, 783 KB

english, 2012

18

A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy

Shi,, Bao,, Weischenfeldt,, Schaefer,, Rogowski,, Schmidt-Hegemann,, Unger,, Lauber,, Wang,, Buchner,, Stief,, Schlomm,, Belka,, Li,

Journal:

Year:

2019

File:

PDF, 1.99 MB

2019

19

Identification of unique and shared mitochondrial DNA mutations in neurodegeneration and cancer by single-cell mitochondrial DNA structural variation sequencing (MitoSV-seq)

Jaberi, Elham, Tresse, Emilie, GrÃ¸nbÃ¦k, Kirsten, Weischenfeldt, Joachim, Issazadeh-Navikas, Shohreh

Journal:

Year:

2020

File:

PDF, 4.89 MB

2020

20

SvABA: genome-wide detection of structural variants and indels by local assembly

Wala, Jeremiah A., Bandopadhayay, Pratiti, Greenwald, Noah, O'Rourke, Ryan, Sharpe, Ted, Stewart, Chip, Schumacher, Steve, Li, Yilong, Weischenfeldt, Joachim, Yao, Xiaotong, Nusbaum, Chad, Campbell, P

Journal:

Genome Research

Year:

2018

Language:

english

File:

PDF, 5.50 MB

english, 2018

21

Bone Marrow-Derived Macrophages (BMM): Isolation and Applications

Weischenfeldt, J., Porse, B.

Journal:

Cold Spring Harbor Protocols

Year:

2008

Language:

english

File:

PDF, 11.88 MB

english, 2008

22

Author Correction: The landscape of genomic alterations across childhood cancers

Gröbner, Susanne N., Worst, Barbara C., Weischenfeldt, Joachim, Buchhalter, Ivo, Kleinheinz, Kortine, Rudneva, Vasilisa A., Johann, Pascal D., Balasubramanian, Gnana Prakash, Segura-Wang, Maia, Brabet

Journal:

Year:

2018

Language:

english

File:

PDF, 341 KB

english, 2018

23

Comparative Analysis of Different Vaccine Constructs Expressing Defined Antigens from Mycobacterium tuberculosis

Doherty, T. Mark, Olsen, Anja W., Weischenfeldt, Joachim, Huygen, Kris, D’Souza, Sushila, Kondratieva, Tatiana K., Yeremeev, Vladimir V., Apt, Alexander S., Raupach, Bärbel, Grode, Leander, Kaufmann,

Journal:

The Journal of Infectious Diseases

Year:

2004

Language:

english

File:

PDF, 645 KB

english, 2004

24

Response to Olaparib in a PALB2 Germline Mutated Prostate Cancer and Genetic Events Associated with Resistance

Horak, Peter, Weischenfeldt, Joachim, von Amsberg, Gunhild, Beyer, Burkhard, Schutte, Andreas, Uhrig, Sebastian, Gieldon, Laura, Klink, Barbara, Feuerbach, Lars, Hubschmann, Daniel, Kreutzfeldt, Simon

Journal:

Molecular Case Studies

Year:

2019

File:

PDF, 1.00 MB

2019

25

NMD is essential for hematopoietic stem and progenitor cells and for eliminating by-products of programmed DNA rearrangements

Weischenfeldt, J., Damgaard, I., Bryder, D., Theilgaard-Monch, K., Thoren, L. A., Nielsen, F. C., Jacobsen, S. E. W., Nerlov, C., Porse, B. T.

Journal:

Genes & Development

Year:

2008

Language:

english

File:

PDF, 1.73 MB

english, 2008

26

Intratumor DNA Methylation Heterogeneity Reflects Clonal Evolution in Aggressive Prostate Cancer

Brocks, David, Assenov, Yassen, Minner, Sarah, Bogatyrova, Olga, Simon, Ronald, Koop, Christina, Oakes, Christopher, Zucknick, Manuela, Lipka, Daniel Bernhard, Weischenfeldt, Joachim, Feuerbach, Lars,

Journal:

Year:

2014

Language:

english

File:

PDF, 2.54 MB

english, 2014

27

The Aging Prostate Is Never “Normal”: Implications from the Genomic Characterization of Multifocal Prostate Cancers

Schlomm, Thorsten, Weischenfeldt, Joachim, Korbel, Jan, Sauter, Guido

Journal:

European Urology

Year:

2015

Language:

english

File:

PDF, 757 KB

english, 2015

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